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Code to deal with alignments written in Fasta format.
This mostly just uses the regular Fasta parsing stuff written by Jeff to deal with all of the input and output formats.
functions: o parse_file()
classes: FastaAlignment
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FastaAlignment Work with the Fasta Alignment format. |
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Parse the given file into a FastaAlignment object. Arguments: o file_name - The location of the file to parse. o type - The type of information contained in the file. |
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