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Bio.SeqIO support for the "ig" (IntelliGenetics or MASE) file format.
You are expected to use this module via the Bio.SeqIO functions.
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Iterate over IntelliGenetics records (as SeqRecord objects). handle - input file alphabet - optional alphabet The optional free format file header lines (which start with two semi-colons) are ignored. The free format commentary lines at the start of each record (which start with a semi-colon) are recorded as a single string with embedded new line characters in the SeqRecord's annotations dictionary under the key 'comment'. |
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