Package Bio :: Package IntelliGenetics :: Module Record
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Module Record

source code

Martel based parser to read IntelliGenetics formatted files.

This is a huge regular regular expression for IntelliGenetics, built using
the 'regular expressiona on steroids' capabilities of Martel.

http://hiv-web.lanl.gov/ALIGN_97/HIV12SIV-index.html

Notes:
Just so I remember -- the new end of line syntax is:
  New regexp syntax - \R
     \R    means "
|
?"
     [\R]  means "[

]"

This helps us have endlines be consistent across platforms.

Classes [hide private]
  Record
Hold IntelliGenetics information in a format similar to the original record.
Functions [hide private]
 
out_sequence(seq) source code