Package Bio :: Package SeqIO :: Module AceIO
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Module AceIO

source code

Bio.SeqIO support for the "ace" file format.

You are expected to use this module via the Bio.SeqIO functions. See also the Bio.Sequencing.Ace module which offers more than just accessing the contig consensus sequences in an ACE file as SeqRecord objects.

Functions [hide private]
 
AceIterator(handle)
Returns SeqRecord objects from an ACE file.
source code
Function Details [hide private]

AceIterator(handle)

source code 

Returns SeqRecord objects from an ACE file.

This uses the Bio.Sequencing.Ace module to do the hard work. Note that by iterating over the file in a single pass, we are forced to ignore any WA, CT, RT or WR footer tags.