Module EZRetrieve
source code
This module contains code to access EZRetrieve (OBSOLETE).
This is a very simple interface to the EZRetrieve website described
in:
Zhang, H., Ramanathan, Y., Soteropoulos, P., Recce, M., and Tolias,
P.P. (2002). EZ-Retrieve: A web-server for batch retrieval of
coordinate-specified human DNA sequences and underscoring putative
transcription factor-binding sites. Nucl. Acids. Res. 2002 30: e121.
http://dx.doi.org/10.1093/nar/gnf120
Functions: retrieve_single Retrieve a single sequence from
EZRetrieve. parse_single Parse the results from EZRetrieve into FASTA
format.
This module is now considered to be obsolete, and is likely to be
deprecated in a future release of Biopython, and later removed.
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retrieve_single(id,
from_,
to,
retrieve_by=None,
organism=None,
parse_results=1) |
source code
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Return a FASTA-formatted string for the sequence. May raise an
AssertionError if there was a problem retrieving the sequence.
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