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C
C
(in
Bio.Nexus.Nexus
)
clear()
(in
Crystal
)
CONTENTMODEL
(in
DbTo
)
c_
(in
Bio.Affy.CelFile
)
clear()
(in
NCBIDictionary
)
CONTENTMODEL
(in
ERROR
)
c_
(in
Bio.distance
)
clear()
(in
_InMemoryIndex
)
CONTENTMODEL
(in
IconUrl
)
ca_depth()
(in
Bio.PDB.ResidueDepth'
)
clear()
(in
Dictionary
)
CONTENTMODEL
(in
Id
)
Cache
(in
Bio.PopGen.SimCoal
)
CLIP
(in
Bio.Affy.CelFile
)
CONTENTMODEL
(in
IdCheckList
)
cai_for_gene()
(in
CodonAdaptationIndex
)
CLIP
(in
Bio.distance
)
CONTENTMODEL
(in
IdList
)
calc_affine_penalty()
(in
Bio.pairwise2
)
close()
(in
FilteredReader
)
CONTENTMODEL
(in
IdUrlList
)
calc_angle()
(in
Bio.PDB.Vector'
)
close()
(in
BerkeleyDB
)
CONTENTMODEL
(in
IdUrlSet
)
calc_dihedral()
(in
Bio.PDB.Vector'
)
close()
(in
MemoryFlatDB
)
CONTENTMODEL
(in
Info
)
calculate()
(in
Bio.LogisticRegression
)
close()
(in
Adaptor
)
CONTENTMODEL
(in
Link
)
calculate()
(in
Bio.MaxEntropy
)
close()
(in
DBServer
)
CONTENTMODEL
(in
LinkName
)
calculate()
(in
Bio.NaiveBayes
)
close()
(in
Parser
)
CONTENTMODEL
(in
LinkSet
)
calculate()
(in
Bio.kNN
)
close()
(in
RecordParser
)
CONTENTMODEL
(in
LinkSetDb
)
calculate_fitness()
(in
DifferentialSchemaFitness
)
closegroup()
(in
GroupNames
)
CONTENTMODEL
(in
Name
)
calculate_fitness()
(in
MostCountSchemaFitness
)
closegroup()
(in
Pattern
)
CONTENTMODEL
(in
NameAbbr
)
CALL
(in
Martel.msre_constants
)
ClustalAlignment
(in
Bio.Clustalw
)
CONTENTMODEL
(in
ObjUrl
)
CALL
(in
Martel.msre_parse
)
ClustalIO
(in
Bio.AlignIO
)
CONTENTMODEL
(in
Provider
)
call()
(in
HandleRepeatCount
)
ClustalIterator
(in
Bio.AlignIO.ClustalIO
)
CONTENTMODEL
(in
Score
)
call_method()
(in
_RecordConsumer
)
Clustalw
(in
Bio
)
CONTENTMODEL
(in
SubjectType
)
call_number()
(in
_RecordConsumer
)
ClustalWriter
(in
Bio.AlignIO.ClustalIO
)
CONTENTMODEL
(in
Url
)
Callback
(in
Martel.Dispatch
)
Cluster
(in
Bio
)
CONTENTMODEL
(in
eLinkResult
)
calltag()
(in
HandleRepeatCount
)
clustercentroids()
(in
Record
)
CONTENTMODEL
(in
ERROR
)
candidate_line
(in
Bio.Saf.saf_format
)
clusterdistance()
(in
Record
)
CONTENTMODEL
(in
Id
)
canvas_angle()
(in
CircularDrawer
)
Cmodulo
(in
PrintFormat
)
CONTENTMODEL
(in
InvalidIdList
)
canvas_location()
(in
LinearDrawer
)
cmp_dicts()
(in
Martel.test.test_attrs
)
CONTENTMODEL
(in
QueryKey
)
CaPPBuilder
(in
Bio.PDB.Polypeptide
)
cmp_sccs()
(in
Bio.SCOP
)
CONTENTMODEL
(in
WebEnv
)
CAPS
(in
Bio
)
co_data()
(in
_RecordConsumer
)
CONTENTMODEL
(in
ePostResult
)
CAPSMap
(in
Bio.CAPS
)
co_header()
(in
_RecordConsumer
)
CONTENTMODEL
(in
Count
)
Capture
(in
Martel.test.test_macros
)
CodonAdaptationIndex
(in
Bio.SeqUtils.CodonUsage
)
CONTENTMODEL
(in
ERROR
)
cartesian()
(in
HashSet
)
CODONPOSITIONS
(in
Bio.Nexus.Nexus
)
CONTENTMODEL
(in
ErrorList
)
cas_registry_number()
(in
_RecordConsumer
)
CodonsDict
(in
Bio.SeqUtils.CodonUsage
)
CONTENTMODEL
(in
Explode
)
Case()
(in
Martel
)
CodonTable
(in
Bio.Data
)
CONTENTMODEL
(in
Field
)
cast
(in
Bio.Affy.CelFile
)
CodonTable
(in
Bio.Data.CodonTable
)
CONTENTMODEL
(in
FieldNotFound
)
cast
(in
Bio.distance
)
CodonUsage
(in
Bio.SeqUtils
)
CONTENTMODEL
(in
From
)
catalyse()
(in
Blunt
)
CodonUsageIndices
(in
Bio.SeqUtils
)
CONTENTMODEL
(in
Id
)
catalyse()
(in
Ov3
)
cofactor()
(in
_RecordConsumer
)
CONTENTMODEL
(in
IdList
)
catalyse()
(in
Ov5
)
collapse()
(in
Chain
)
CONTENTMODEL
(in
OP
)
catalyse()
(in
Unknown
)
collapse_genera()
(in
Tree
)
CONTENTMODEL
(in
OutputMessage
)
catalytic_activity()
(in
_RecordConsumer
)
collectRules()
(in
GenericParser
)
CONTENTMODEL
(in
PhraseIgnored
)
CatchFields
(in
Martel.test.test_delimiter
)
colonformat
(in
Martel.test.testformats.delimiter
)
CONTENTMODEL
(in
PhraseNotFound
)
categories
(in
Martel.convert_re
)
ColorTranslator
(in
Bio.Graphics.GenomeDiagram._Colors
)
CONTENTMODEL
(in
QueryKey
)
CATEGORIES
(in
Martel.msre_parse
)
Cols()
(in
CelConsumer
)
CONTENTMODEL
(in
QueryTranslation
)
categories
(in
Martel.test.test_convert_re
)
ColumnUnit
(in
Bio.Wise.psw
)
CONTENTMODEL
(in
QuotedPhraseNotFound
)
category
(in
FieldNotFound
)
combine()
(in
Bio.Nexus.Nexus
)
CONTENTMODEL
(in
RetMax
)
category
(in
OutputMessage
)
commaformat
(in
Martel.test.testformats.delimiter
)
CONTENTMODEL
(in
RetStart
)
category
(in
PhraseIgnored
)
command_line()
(in
AlignAceConsumer
)
CONTENTMODEL
(in
Term
)
category
(in
PhraseNotFound
)
command_line()
(in
AlignAceConsumer
)
CONTENTMODEL
(in
TermSet
)
category
(in
QuotedPhraseNotFound
)
Commandline
(in
Bio.Nexus.Nexus
)
CONTENTMODEL
(in
To
)
CATEGORY
(in
Martel.msre_constants
)
Comment
CONTENTMODEL
(in
Translation
)
CATEGORY
(in
Martel.msre_parse
)
comment
(in
Martel.test.test_swissprot38
)
CONTENTMODEL
(in
TranslationSet
)
CATEGORY_DIGIT
(in
Martel.msre_constants
)
comment
(in
Martel.test.testformats.swissprot38
)
CONTENTMODEL
(in
TranslationStack
)
CATEGORY_DIGIT
(in
Martel.msre_parse
)
comment()
(in
ElementNode
)
CONTENTMODEL
(in
WarningList
)
CATEGORY_LINEBREAK
(in
Martel.msre_constants
)
comment()
(in
_RecordConsumer
)
CONTENTMODEL
(in
WebEnv
)
CATEGORY_LINEBREAK
(in
Martel.msre_parse
)
comment()
(in
_FeatureConsumer
)
CONTENTMODEL
(in
eSearchResult
)
CATEGORY_LOC_NOT_WORD
(in
Martel.msre_constants
)
comment()
(in
_RecordConsumer
)
CONTENTMODEL
(in
DocSum
)
CATEGORY_LOC_NOT_WORD
(in
Martel.msre_parse
)
comment()
(in
_RecordConsumer
)
CONTENTMODEL
(in
ERROR
)
CATEGORY_LOC_WORD
(in
Martel.msre_constants
)
comment()
(in
_RecordConsumer
)
CONTENTMODEL
(in
Id
)
CATEGORY_LOC_WORD
(in
Martel.msre_parse
)
comment()
(in
_RecordConsumer
)
CONTENTMODEL
(in
Item
)
CATEGORY_NEWLINE
(in
Martel.msre_constants
)
comment()
(in
_RecordConsumer
)
CONTENTMODEL
(in
eSummaryResult
)
CATEGORY_NEWLINE
(in
Martel.msre_parse
)
comment()
(in
_RecordConsumer
)
ContentModel
CATEGORY_NOT_DIGIT
(in
Martel.msre_constants
)
comment()
(in
_SequenceConsumer
)
CONTENTMODEL
(in
ElementNode
)
CATEGORY_NOT_DIGIT
(in
Martel.msre_parse
)
comment_line
(in
Bio.Emboss.primer3_format
)
contents()
(in
Bio.listfns
)
CATEGORY_NOT_LINEBREAK
(in
Martel.msre_constants
)
comment_line
(in
Bio.IntelliGenetics.intelligenetics_format
)
Contig
(in
Bio.Sequencing.Ace
)
CATEGORY_NOT_LINEBREAK
(in
Martel.msre_parse
)
comment_line
(in
Bio.NBRF.nbrf_format
)
contig_location()
(in
_FeatureConsumer
)
CATEGORY_NOT_SPACE
(in
Martel.msre_constants
)
comment_line
(in
Bio.Saf.saf_format
)
contig_location()
(in
_RecordConsumer
)
CATEGORY_NOT_SPACE
(in
Martel.msre_parse
)
comment_lines
(in
Bio.IntelliGenetics.intelligenetics_format
)
Controller
(in
Bio.PopGen.FDist
)
CATEGORY_NOT_WORD
(in
Martel.msre_constants
)
comments
(in
Bio.Emboss.primer3_format
)
Controller
(in
Bio.PopGen.SimCoal
)
CATEGORY_NOT_WORD
(in
Martel.msre_parse
)
comments()
(in
_Primer3RecordConsumer
)
converged()
(in
_DescriptionConsumer
)
CATEGORY_SPACE
(in
Martel.msre_constants
)
comments()
(in
_RecordConsumer
)
ConversionMutation
(in
Bio.GA.Mutation.Simple
)
CATEGORY_SPACE
(in
Martel.msre_parse
)
Commercially_available
(in
Bio.Restriction.Restriction
)
convert_absolute_support()
(in
Tree
)
CATEGORY_UNI_DIGIT
(in
Martel.msre_constants
)
commit()
(in
Adaptor
)
convert_any()
(in
Martel.convert_re
)
CATEGORY_UNI_DIGIT
(in
Martel.msre_parse
)
commit()
(in
DBServer
)
convert_assert()
(in
Martel.convert_re
)
CATEGORY_UNI_LINEBREAK
(in
Martel.msre_constants
)
common_ancestor()
(in
Tree
)
convert_assert_not()
(in
Martel.convert_re
)
CATEGORY_UNI_LINEBREAK
(in
Martel.msre_parse
)
CommOnly
(in
Bio.Restriction.Restriction
)
convert_at()
(in
Martel.convert_re
)
CATEGORY_UNI_NOT_DIGIT
(in
Martel.msre_constants
)
Comparative
(in
Bio.Graphics
)
convert_branch()
(in
Martel.convert_re
)
CATEGORY_UNI_NOT_DIGIT
(in
Martel.msre_parse
)
ComparativeScatterPlot
(in
Bio.Graphics.Comparative
)
convert_genepop_to_fdist()
(in
Bio.PopGen.FDist.Utils
)
CATEGORY_UNI_NOT_LINEBREAK
(in
Martel.msre_constants
)
compare()
(in
Martel.test.test_Expression
)
convert_groupref()
(in
Martel.convert_re
)
CATEGORY_UNI_NOT_LINEBREAK
(in
Martel.msre_parse
)
compare_motifs()
(in
MEMEMotif
)
convert_in()
(in
Martel.convert_re
)
CATEGORY_UNI_NOT_SPACE
(in
Martel.msre_constants
)
CompareAce()
(in
Bio.AlignAce.CompareAceStandalone
)
convert_list()
(in
Martel.convert_re
)
CATEGORY_UNI_NOT_SPACE
(in
Martel.msre_parse
)
CompareAceCommandline
(in
Bio.AlignAce.Applications
)
convert_literal()
(in
Martel.convert_re
)
CATEGORY_UNI_NOT_WORD
(in
Martel.msre_constants
)
CompareAceConsumer
(in
Bio.AlignAce.Parser
)
convert_max_repeat()
(in
Martel.convert_re
)
CATEGORY_UNI_NOT_WORD
(in
Martel.msre_parse
)
CompareAceConsumer
(in
Bio.Motif.Parsers.AlignAce
)
convert_newline()
(in
Martel.convert_re
)
CATEGORY_UNI_SPACE
(in
Martel.msre_constants
)
CompareAceParser
(in
Bio.AlignAce.Parser
)
convert_not_literal()
(in
Martel.convert_re
)
CATEGORY_UNI_SPACE
(in
Martel.msre_parse
)
CompareAceParser
(in
Bio.Motif.Parsers.AlignAce
)
convert_re
(in
Martel
)
CATEGORY_UNI_WORD
(in
Martel.msre_constants
)
CompareAceScanner
(in
Bio.AlignAce.Scanner
)
convert_subpattern()
(in
Martel.convert_re
)
CATEGORY_UNI_WORD
(in
Martel.msre_parse
)
CompareAceScanner
(in
Bio.Motif.Parsers.AlignAce
)
convert_summary_Date()
(in
Bio.EUtils.parse
)
CATEGORY_WORD
(in
Martel.msre_constants
)
CompareAceStandalone
(in
Bio.AlignAce
)
convert_summary_Date_string()
(in
Bio.EUtils.parse
)
CATEGORY_WORD
(in
Martel.msre_parse
)
Compass
(in
Bio
)
convert_summary_Integer()
(in
Bio.EUtils.parse
)
CC
(in
Martel.test.test_swissprot38
)
compatible_end()
(in
Blunt
)
convert_summary_Items()
(in
Bio.EUtils.parse
)
CC
(in
Martel.test.testformats.swissprot38
)
compatible_end()
(in
Ov3
)
convert_summary_List()
(in
Bio.EUtils.parse
)
CC_begin
(in
Martel.test.test_swissprot38
)
compatible_end()
(in
Ov5
)
convert_summary_String()
(in
Bio.EUtils.parse
)
CC_begin
(in
Martel.test.testformats.swissprot38
)
compatible_end()
(in
Unknown
)
convert_summary_Unknown()
(in
Bio.EUtils.parse
)
CC_copyright
(in
Martel.test.test_swissprot38
)
compile()
(in
Bio.Prosite.Pattern
)
ConvertDispatchHandler
(in
Bio.StdHandler
)
CC_copyright
(in
Martel.test.testformats.swissprot38
)
compile_file()
(in
Bio.EUtils.dtd2py
)
converter_table
(in
Martel.convert_re
)
CC_copyright_begin
(in
Martel.test.test_swissprot38
)
complement()
(in
MutableSeq
)
converter_table
(in
Martel.test.test_convert_re
)
CC_copyright_begin
(in
Martel.test.testformats.swissprot38
)
complement()
(in
Seq
)
ConvertHandler
(in
Bio.StdHandler
)
CC_copyright_end
(in
Martel.test.test_swissprot38
)
complement()
(in
UnknownSeq
)
convex_basis_block
(in
Bio.MetaTool.metatool_format
)
CC_copyright_end
(in
Martel.test.testformats.swissprot38
)
complement_alphabet
(in
Bio.Restriction._Update.RestrictionCompiler
)
convex_basis_line
(in
Bio.MetaTool.metatool_format
)
CDATA
Compound
(in
Bio.KEGG
)
convex_basis_tag
(in
Bio.MetaTool.metatool_format
)
ceil
(in
Bio.Affy.CelFile
)
compression
(in
Bio.Mindy
)
convex_basis_tag()
(in
_RecordConsumer
)
ceil
(in
Bio.distance
)
Config
(in
Bio.EUtils
)
copy()
(in
Crystal
)
CelConsumer
(in
Bio.Affy.CelFile
)
conj
(in
Bio.Affy.CelFile
)
copy()
(in
Organism
)
CelFile
(in
Bio.Affy
)
conj
(in
Bio.distance
)
copy()
(in
NCBIDictionary
)
CelParser
(in
Bio.Affy.CelFile
)
conjugate
(in
Bio.Affy.CelFile
)
copy()
(in
Vector
)
CelRecord
(in
Bio.Affy.CelFile
)
conjugate
(in
Bio.distance
)
copy()
(in
PrositeTerm
)
CelScanner
(in
Bio.Affy.CelFile
)
connection
(in
Bio.DocSQL
)
copy()
(in
Dictionary
)
centre
(in
GraphData
)
Connection
(in
Bio.GFF
)
copy()
(in
Any
)
CH_LOCALE
(in
Martel.msre_constants
)
ConnectionError
(in
Bio.Restriction._Update.Update
)
copy()
(in
AnyEol
)
CH_LOCALE
(in
Martel.msre_parse
)
consensus()
(in
Motif
)
copy()
(in
Assert
)
CH_UNICODE
(in
Martel.msre_constants
)
consensus()
(in
Bio.Nexus.Trees
)
copy()
(in
AtBeginning
)
CH_UNICODE
(in
Martel.msre_parse
)
conservation_relations_block
(in
Bio.MetaTool.metatool_format
)
copy()
(in
AtEnd
)
Chain
(in
Bio.Crystal
)
conservation_relations_line
(in
Bio.MetaTool.metatool_format
)
copy()
(in
Debug
)
Chain
(in
Bio.Nexus.Nodes
)
conservation_relations_tag
(in
Bio.MetaTool.metatool_format
)
copy()
(in
Dot
)
Chain
(in
Bio.PDB
)
conservation_relations_tag()
(in
_RecordConsumer
)
copy()
(in
Expression
)
Chain
(in
Bio.PDB.Chain
)
ConsoleWidth
(in
PrintFormat
)
copy()
(in
ExpressionList
)
chain_id
(in
align
)
ConsoleWidth
(in
Bio.Restriction.RanaConfig
)
copy()
(in
FastFeature
)
ChainException
(in
Bio.Nexus.Nodes
)
consrtm()
(in
_FeatureConsumer
)
copy()
(in
Group
)
ChainSelector
(in
Bio.PDB.Dice
)
consrtm()
(in
_RecordConsumer
)
copy()
(in
GroupRef
)
change()
(in
Analysis
)
constant()
(in
Nexus
)
copy()
(in
HeaderFooter
)
characteristic()
(in
NoCut
)
contains()
(in
Alphabet
)
copy()
(in
Literal
)
characteristic()
(in
OneCut
)
contains()
(in
AlphabetEncoder
)
copy()
(in
MaxRepeat
)
characteristic()
(in
TwoCuts
)
contains()
(in
Gapped
)
copy()
(in
NullOp
)
characters()
(in
_XMLparser
)
contains()
(in
HasStopCodon
)
copy()
(in
ParseRecords
)
characters()
(in
ObjectParserHandler
)
contains()
(in
HashSet
)
copy()
(in
PassThrough
)
characters()
(in
DataHandler
)
ContentHandler
(in
Bio.ExPASy.ScanProsite
)
copy()
(in
Str
)
characters()
(in
ContentHandler
)
CONTENTMODEL
(in
Attribute
)
copy()
(in
IterHeaderFooter
)
characters()
(in
GrabXPathNodes
)
CONTENTMODEL
(in
Base
)
copy()
(in
IterRecords
)
characters()
(in
EventGenerator
)
CONTENTMODEL
(in
Brief
)
copy()
(in
IteratorRecords
)
characters()
(in
Dispatcher
)
CONTENTMODEL
(in
Database
)
copy()
(in
HeaderFooterParser
)
characters()
(in
LAX
)
CONTENTMODEL
(in
ExclQuery
)
copy()
(in
Parser
)
characters()
(in
Dump
)
CONTENTMODEL
(in
IconUrl
)
copy()
(in
RecordParser
)
characters()
(in
CatchFields
)
CONTENTMODEL
(in
InclQuery
)
copyright
(in
Martel.test.test_swissprot38
)
CharBuffer
(in
Bio.Nexus.Nexus
)
CONTENTMODEL
(in
Link
)
cos
(in
Bio.Affy.CelFile
)
charged_aas
(in
Bio.SeqUtils.IsoelectricPoint
)
CONTENTMODEL
(in
LinkId
)
cos
(in
Bio.distance
)
CHARSET
(in
Bio.Nexus.Nexus
)
CONTENTMODEL
(in
LinkSet
)
cosh
(in
Bio.Affy.CelFile
)
CHARSET
(in
Martel.msre_constants
)
CONTENTMODEL
(in
Name
)
cosh
(in
Bio.distance
)
CHARSET
(in
Martel.msre_parse
)
CONTENTMODEL
(in
NameAbbr
)
Count
(in
Bio.EUtils.DTDs.eInfo_020511
)
CHCODES
(in
Martel.msre_constants
)
CONTENTMODEL
(in
ObjId
)
Count
(in
Bio.EUtils.DTDs.eSearch_020511
)
CHCODES
(in
Martel.msre_parse
)
CONTENTMODEL
(in
ObjectList
)
COUNT
(in
Bio.SubsMat.FreqTable
)
check_assert()
(in
Martel.Generate
)
CONTENTMODEL
(in
ObjectSelector
)
count()
(in
Chain
)
check_assert_not()
(in
Martel.Generate
)
CONTENTMODEL
(in
ObjectUrl
)
count()
(in
PatternRepository
)
check_at_beginning()
(in
Martel.Generate
)
CONTENTMODEL
(in
Provider
)
count()
(in
MutableSeq
)
check_dicts()
(in
Martel.test.test_attrs
)
CONTENTMODEL
(in
ProviderId
)
count()
(in
Seq
)
check_element()
(in
Martel.test.test_attrs
)
CONTENTMODEL
(in
Query
)
count()
(in
UnknownSeq
)
check_error_pos()
(in
Martel.test.test_optimize
)
CONTENTMODEL
(in
Rule
)
count()
(in
Bio.listfns
)
check_install()
(in
Martel.setup
)
CONTENTMODEL
(in
RuleToMany
)
count_amino_acids()
(in
ProteinAnalysis
)
check_mxTextTools()
(in
Martel.setup
)
CONTENTMODEL
(in
Separator
)
count_monomers()
(in
Bio.utils
)
CheckAssert
(in
Martel.Generate
)
CONTENTMODEL
(in
SubObjectSelector
)
count_records()
(in
Martel.test.test_RecordReader2
)
CheckAssertNot
(in
Martel.Generate
)
CONTENTMODEL
(in
SubProvider
)
count_terminals()
(in
Tree
)
CheckGood
(in
Martel.test.support
)
CONTENTMODEL
(in
SubjectType
)
CountErrors
(in
Martel.test.test_Parser
)
checkgroup()
(in
GroupNames
)
CONTENTMODEL
(in
Url
)
CountLines
(in
Martel.RecordReader
)
checkgroup()
(in
Pattern
)
CONTENTMODEL
(in
UrlName
)
CountRecords
(in
Martel.test.test_Parser
)
CheckGroupRef
(in
Martel.Generate
)
CONTENTMODEL
(in
apad
)
country()
(in
_RecordConsumer
)
CheckLinkSet
(in
Bio.EUtils.Datatypes
)
CONTENTMODEL
(in
normalize
)
crc32()
(in
Bio.SeqUtils.CheckSum
)
CheckSum
(in
Bio.SeqUtils
)
CONTENTMODEL
(in
pad
)
crc64()
(in
Bio.SeqUtils.CheckSum
)
chem()
(in
_RecordConsumer
)
CONTENTMODEL
(in
strip
)
Create
(in
Bio.DocSQL
)
child_edges()
(in
Graph
)
CONTENTMODEL
(in
subs
)
create()
(in
Bio.Mindy.BerkeleyDB
)
child_edges()
(in
MultiGraph
)
CONTENTMODEL
(in
tolower
)
create()
(in
Bio.Mindy.FlatDB
)
children()
(in
Graph
)
CONTENTMODEL
(in
toupper
)
create_berkeleydb()
(in
Bio.Mindy.SimpleSeqRecord
)
children()
(in
MultiGraph
)
CONTENTMODEL
(in
Count
)
create_flatdb()
(in
Bio.Mindy.SimpleSeqRecord
)
chomp()
(in
Bio.Decode
)
CONTENTMODEL
(in
DbInfo
)
CreateDict
(in
Bio.PropertyManager
)
chompchomp()
(in
Bio.Decode
)
CONTENTMODEL
(in
DbList
)
crop_matrix()
(in
Nexus
)
chromat_file()
(in
_RecordConsumer
)
CONTENTMODEL
(in
DbName
)
Crossover
(in
Bio.GA
)
Chromosome
(in
Bio.Graphics.BasicChromosome
)
CONTENTMODEL
(in
DbTo
)
Crystal
(in
Bio
)
CHROMOSOME()
(in
_RecordConsumer
)
CONTENTMODEL
(in
Descriptor
)
Crystal
(in
Bio.Crystal
)
ChromosomeCounts
(in
Bio.Graphics.DisplayRepresentation
)
CONTENTMODEL
(in
ERROR
)
CrystalError
(in
Bio.Crystal
)
ChromosomeSegment
(in
Bio.Graphics.BasicChromosome
)
CONTENTMODEL
(in
Field
)
cstatus()
(in
Nexus
)
CircularDrawer
(in
Bio.Graphics.GenomeDiagram._CircularDrawer
)
CONTENTMODEL
(in
FiledList
)
ct
(in
Bio.Sequencing.Ace
)
circularise()
(in
FormattedSeq
)
CONTENTMODEL
(in
Hierarchy
)
ct_data()
(in
_RecordConsumer
)
CKEYWORDS
(in
Bio.Sequencing.Phd
)
CONTENTMODEL
(in
IsDate
)
ct_start()
(in
_RecordConsumer
)
Cla
(in
Bio.SCOP
)
CONTENTMODEL
(in
IsNumerical
)
current_suppliers()
(in
RestrictionBatch
)
class_update_date()
(in
_RecordConsumer
)
CONTENTMODEL
(in
Link
)
cursor()
(in
Query
)
classdict
(in
Bio.Restriction._Update.RestrictionCompiler
)
CONTENTMODEL
(in
LinkList
)
cursor()
(in
QuerySingle
)
ClassHolder
(in
Bio.EUtils.sourcegen
)
CONTENTMODEL
(in
Menu
)
cut_once()
(in
NoCut
)
classify()
(in
Bio.LogisticRegression
)
CONTENTMODEL
(in
MenuName
)
cut_once()
(in
OneCut
)
classify()
(in
Bio.MaxEntropy
)
CONTENTMODEL
(in
Name
)
cut_once()
(in
TwoCuts
)
classify()
(in
Bio.NaiveBayes
)
CONTENTMODEL
(in
SingleToken
)
cut_twice()
(in
NoCut
)
classify()
(in
Bio.kNN
)
CONTENTMODEL
(in
TermCount
)
cut_twice()
(in
OneCut
)
clean()
(in
AlignmentWriter
)
CONTENTMODEL
(in
eInfoResult
)
cut_twice()
(in
TwoCuts
)
clean()
(in
SequenceWriter
)
CONTENTMODEL
(in
Attribute
)
clean_value()
(in
FeatureValueCleaner
)
CONTENTMODEL
(in
DbFrom
)
Trees
Indices
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