Package Bio :: Package Motif :: Module _Motif
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Module _Motif

source code

Implementation of sequence motifs.

Changes: 10.2007 - BW added matrix (vertical, horizontal) input, jaspar, transfac-like output 26.08.2007 - added a background attribute (Bartek Wilczynski) 26.08.2007 - added a DPQ measure (Bartek Wilczynski) 9.2007 (BW) : added the .to_fasta() and .weblogo() methods allowing to use the Berkeley weblogo server at http://weblogo.berkeley.edu/

Classes [hide private]
  Motif
A class representing sequence motifs.