Package Bio :: Package Emboss :: Module primer3_format
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Module Bio.Emboss.primer3_format

Martel definitions for the output files produced by primer3.
Variable Summary
MaxRepeat any_float = <Martel.Expression.MaxRepeat instance at 0xb...
MaxRepeat any_integer = <Martel.Expression.MaxRepeat instance at 0...
MaxRepeat any_space = <Martel.Expression.MaxRepeat instance at 0xb...
AnyEol blank_line = <Martel.Expression.AnyEol instance at 0xb76...
Seq comment_line = <Martel.Expression.Seq instance at 0xb74f...
Group comments = <Martel.Expression.Group instance at 0xb74f8a...
Group forward_line = <Martel.Expression.Group instance at 0xb7...
Group forward_primer_gc = <Martel.Expression.Group instance at...
Group forward_primer_length = <Martel.Expression.Group instanc...
Group forward_primer_seq = <Martel.Expression.Group instance a...
Group forward_primer_start = <Martel.Expression.Group instance...
Group forward_primer_tm = <Martel.Expression.Group instance at...
Group internal_line = <Martel.Expression.Group instance at 0xb...
Group internal_oligo_gc = <Martel.Expression.Group instance at...
Group internal_oligo_length = <Martel.Expression.Group instanc...
Group internal_oligo_seq = <Martel.Expression.Group instance a...
Group internal_oligo_start = <Martel.Expression.Group instance...
Group internal_oligo_tm = <Martel.Expression.Group instance at...
Str primer_space = <Martel.Expression.Str instance at 0xb74f...
Group primer_start_line = <Martel.Expression.Group instance at...
Group product_size = <Martel.Expression.Group instance at 0xb7...
Group record = <Martel.Expression.Group instance at 0xb768b70c...
Group reverse_line = <Martel.Expression.Group instance at 0xb7...
Group reverse_primer_gc = <Martel.Expression.Group instance at...
Group reverse_primer_length = <Martel.Expression.Group instanc...
Group reverse_primer_seq = <Martel.Expression.Group instance a...
Group reverse_primer_start = <Martel.Expression.Group instance...
Group reverse_primer_tm = <Martel.Expression.Group instance at...
MaxRepeat sequence = <Martel.Expression.MaxRepeat instance at 0xb7...
Group single_primer_line = <Martel.Expression.Group instance a...
Group start_primer = <Martel.Expression.Group instance at 0xb7...

Variable Details

any_float

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0xb74f8e2c>                   

any_integer

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0xb74f8e8c>                   

any_space

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0xb74f8acc>                   

blank_line

Type:
AnyEol
Value:
<Martel.Expression.AnyEol instance at 0xb76a294c>                      

comment_line

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb74f8b0c>                         

comments

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8aac>                       

forward_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b06c>                       

forward_primer_gc

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8fac>                       

forward_primer_length

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8e0c>                       

forward_primer_seq

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8fec>                       

forward_primer_start

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8e4c>                       

forward_primer_tm

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8f6c>                       

internal_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b42c>                       

internal_oligo_gc

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b38c>                       

internal_oligo_length

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b30c>                       

internal_oligo_seq

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b3cc>                       

internal_oligo_start

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b2cc>                       

internal_oligo_tm

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b34c>                       

primer_space

Type:
Str
Value:
<Martel.Expression.Str instance at 0xb74f8dec>                         

primer_start_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8d0c>                       

product_size

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8c0c>                       

record

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b70c>                       

reverse_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b24c>                       

reverse_primer_gc

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b1ac>                       

reverse_primer_length

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b12c>                       

reverse_primer_seq

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b1ec>                       

reverse_primer_start

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b0ec>                       

reverse_primer_tm

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb768b16c>                       

sequence

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0xb74f8f0c>                   

single_primer_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8d8c>                       

start_primer

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb74f8c8c>                       

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