Package Bio :: Package expressions :: Module fasta
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Module Bio.expressions.fasta

Function Summary
  make_1id(s, dbname, name)
  make_2id(s, dbname, primary_name, secondary_name)

Variable Summary
MaxRepeat comment_lines = <Martel.Expression.MaxRepeat instance at...
HeaderFooter format = <Martel.Expression.HeaderFooter instance at 0xb...
Group generic_term = <Martel.Expression.Group instance at 0xb7...
Seq gnl_id = <Martel.Expression.Seq instance at 0xb775968c>
Alt id_term = <Martel.Expression.Alt instance at 0xb7759b0c>
list ids = [<Martel.Expression.Seq instance at 0xb76f852c>, <...
Seq ncbi_term = <Martel.Expression.Seq instance at 0xb7759a0...
Group ncbi_word = <Martel.Expression.Group instance at 0xb7759...
Group record = <Martel.Expression.Group instance at 0xb7759fcc...
Seq seqline = <Martel.Expression.Seq instance at 0xb7759e4c>
Seq seqline_nonewline = <Martel.Expression.Seq instance at 0...
Group sequence = <Martel.Expression.Group instance at 0xb7759f...
Seq title = <Martel.Expression.Seq instance at 0xb7759d4c>

Variable Details

comment_lines

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0xb7759bcc>                   

format

Type:
HeaderFooter
Value:
<Martel.Expression.HeaderFooter instance at 0xb76e306c>                

generic_term

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb7759acc>                       

gnl_id

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb775968c>                         

id_term

Type:
Alt
Value:
<Martel.Expression.Alt instance at 0xb7759b0c>                         

ids

Type:
list
Value:
[<Martel.Expression.Seq instance at 0xb76f852c>,
 <Martel.Expression.Seq instance at 0xb76f890c>,
 <Martel.Expression.Seq instance at 0xb76f8acc>,
 <Martel.Expression.Seq instance at 0xb76f8c8c>,
 <Martel.Expression.Seq instance at 0xb76f8d6c>,
 <Martel.Expression.Seq instance at 0xb76f8e6c>,
 <Martel.Expression.Seq instance at 0xb775906c>,
 <Martel.Expression.Seq instance at 0xb775922c>,
...                                                                    

ncbi_term

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb7759a0c>                         

ncbi_word

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb775994c>                       

record

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb7759fcc>                       

seqline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb7759e4c>                         

seqline_nonewline

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb7759e8c>                         

sequence

Type:
Group
Value:
<Martel.Expression.Group instance at 0xb7759f6c>                       

title

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb7759d4c>                         

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