Trees | Index | Help |
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Package Bio :: Package Nexus :: Module Trees |
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Classes | |
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NodeData |
Stores tree-relevant data associated with nodes (e.g. |
Tree |
Represents a tree using a chain of nodes with on predecessor (=ancestor) and multiple successors (=subclades). |
Exceptions | |
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TreeError |
Function Summary | |
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Compute a majority rule consensus tree of all clades with relative frequency>=threshold from a list of trees. |
Variable Summary | |
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int |
PRECISION_BRANCHLENGTH = 6 |
int |
PRECISION_SUPPORT = 6 |
Function Details |
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consensus(trees, threshold=0.5, outgroup=None)Compute a majority rule consensus tree of all clades with relative frequency>=threshold from a list of trees. |
Variable Details |
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PRECISION_BRANCHLENGTH
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PRECISION_SUPPORT
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Trees | Index | Help |
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