Package Bio :: Package dbdefs :: Module genbank
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Module Bio.dbdefs.genbank

Variable Summary
Seq diagnostic_error_expr = <Martel.Expression.Seq instance ...
Str error_expr = <Martel.Expression.Str instance at 0xb70cf6...
DBGroup gb_nucleotide = <Bio.config.DBRegistry.DBGroup instance ...
DBGroup gb_protein = <Bio.config.DBRegistry.DBGroup instance at ...
list ncbi_failures = [(<Martel.Expression.Seq instance at 0xb...
Seq not_exist_expr = <Martel.Expression.Seq instance at 0xb7...
EUtilsDB nucleotide_genbank_eutils = <Bio.config.DBRegistry.EUtil...
EUtilsDB protein_genbank_eutils = <Bio.config.DBRegistry.EUtilsDB...
Seq proxy_error_expr = <Martel.Expression.Seq instance at 0x...

Variable Details

diagnostic_error_expr

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb70cf60c>                         

error_expr

Type:
Str
Value:
<Martel.Expression.Str instance at 0xb70cf62c>                         

gb_nucleotide

Type:
DBGroup
Value:
<Bio.config.DBRegistry.DBGroup instance at 0xb70cf8cc>                 

gb_protein

Type:
DBGroup
Value:
<Bio.config.DBRegistry.DBGroup instance at 0xb70cf9ec>                 

ncbi_failures

Type:
list
Value:
[(<Martel.Expression.Seq instance at 0xb70cf4cc>, 'proxy error'),
 (<Martel.Expression.Seq instance at 0xb70cf60c>, 'diagnostic error'),
 (<Martel.Expression.Str instance at 0xb70cf62c>, 'ERROR'),
 (<Martel.Expression.Seq instance at 0xb714296c>,
  "I got HTML and shouldn't have"),
 (<Martel.Expression.Str instance at 0xb70cf64c>, 'Please try again la\
ter'),
 (<Martel.Expression.Str instance at 0xb70cf66c>, 'Sequence withdrawn'\
...                                                                    

not_exist_expr

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb70cf7ec>                         

nucleotide_genbank_eutils

Type:
EUtilsDB
Value:
<Bio.config.DBRegistry.EUtilsDB instance at 0xb70cf68c>                

protein_genbank_eutils

Type:
EUtilsDB
Value:
<Bio.config.DBRegistry.EUtilsDB instance at 0xb70cf82c>                

proxy_error_expr

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0xb70cf4cc>                         

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